LOC_Os11g05552 (Os11g0153600)


Aliases : Os11g0153600

Description : 29.3.3 protein.targeting.chloroplast mutant has Yellow first leaves Chloroplast Signal Recognition Particle Subunit chloroplast signal recognition particle 54 kDa subunit (CPSRP54)


Gene families : OG_01_0005541 (Gene family) Phylogenetic Tree(s): OG0005541_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os11g05552
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT5G03940 54CP, SRP54CP,... chloroplast signal recognition particle 54 kDa subunit 0.17 Gene family
Cpa|evm.model.tig00021464.55 No alias 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.01 Gene family
Cre11.g479750 No alias 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.05 Gene family
GSVIVT01033862001 No alias 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.07 Gene family
MA_10274946g0010 No alias 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.03 Gene family
Solyc09g009940.3.1 Solyc09g009940.3 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.07 Gene family
Zm00001d023431 GRMZM2G113093 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.1 Gene family
Zm00001d052556 GRMZM2G127230 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.17 Gene family

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013822 Signal_recog_particl_SRP54_hlx 75 152
IPR000897 SRP54_GTPase_dom 170 196
No external refs found!