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  5. Solyc06g007530.2.1

Solyc06g007530.2.1 (Solyc06g007530)


Aliases : Solyc06g007530

Description : transcription factor (REM)


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g007530.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00151100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.06 OrthoFinder output from all 47 species
Ala_g04057 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g28493 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23425 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51859 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06897 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22457 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25439 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36068 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G084400.1 Ceric.02G084400 REM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15058 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41437 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43688 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024536001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
GSVIVT01031761001 No alias RNA biosynthesis.transcriptional activation.B3... 0.05 OrthoFinder output from all 47 species
Gb_07025 No alias transcription factor (REM) 0.07 OrthoFinder output from all 47 species
Gb_35990 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Gb_37791 No alias Putative B3 domain-containing protein Os03g0621600... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08620.1 LOC_Os03g08620 transcription factor (REM) 0.04 OrthoFinder output from all 47 species
LOC_Os05g40280.1 LOC_Os05g40280 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Len_g55690 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56640 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28691 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g29370 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Mp2g08790.1 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39771 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28568 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01929 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48173 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03459 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12989 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49592 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g56976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g00720 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29854 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000624_P003 Zm00001e000624 transcription factor (REM) 0.06 OrthoFinder output from all 47 species
Zm00001e020584_P001 Zm00001e020584 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Zm00001e040028_P004 Zm00001e040028 transcription factor (REM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0032299 ribonuclease H2 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 141 231
No external refs found!