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  5. Solyc06g007510.3.1

Solyc06g007510.3.1 (UBC10, Solyc06g007510)


Aliases : UBC10, Solyc06g007510

Description : conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g007510.3.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00061940 UBC10,... Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.02 OrthoFinder output from all 47 species
AT5G41700 ATUBC8, UBC8 ubiquitin conjugating enzyme 8 0.04 OrthoFinder output from all 47 species
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.08 OrthoFinder output from all 47 species
AT5G56150 UBC30 ubiquitin-conjugating enzyme 30 0.03 OrthoFinder output from all 47 species
Adi_g029541 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30294 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32602 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06450 UBC9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10989 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37368 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09895 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19405 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05035.t1 ATUBC11, UBC11,... E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29033.t1 ATUBC8, UBC8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45807.t1 UBC10, Aspi01Gene45807 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0123.g048365 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.03 OrthoFinder output from all 47 species
Azfi_s0136.g050975 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.04 OrthoFinder output from all 47 species
Cba_g09629 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19798 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71490 ATUBC11, UBC11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78294 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.02 OrthoFinder output from all 47 species
Ceric.07G099900.1 UBC37, Ceric.07G099900 not classified & original description: pacid=50626134... 0.02 OrthoFinder output from all 47 species
Ceric.19G022100.1 UBC10, Ceric.19G022100 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Cre06.g292800 UBC30 Protein degradation.peptide... 0.04 OrthoFinder output from all 47 species
Cre16.g693700 UBC10 Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
Dac_g04910 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07349 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03179 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20628 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04269 ATUBC8, UBC8 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014758001 UBC10 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
GSVIVT01019484001 UBC10 Protein degradation.peptide... 0.05 OrthoFinder output from all 47 species
GSVIVT01025872001 UBC10 Protein degradation.peptide... 0.1 OrthoFinder output from all 47 species
Gb_07393 ATUBC11, UBC11 Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os01g46926.1 UBC9, LOC_Os01g46926 conjugation E2 protein 0.06 OrthoFinder output from all 47 species
LOC_Os01g60410.3 ATUBC11, UBC11,... conjugation E2 protein 0.04 OrthoFinder output from all 47 species
LOC_Os02g16040.1 UBC10, LOC_Os02g16040 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
LOC_Os04g57220.2 UBC10, LOC_Os04g57220 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Len_g18731 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27675 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05219 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14159 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23404 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g31695 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31742 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g18170.1 ATUBC11, UBC11 conjugation E2 protein 0.05 OrthoFinder output from all 47 species
Mp5g21800.1 UBC10 conjugation E2 protein 0.07 OrthoFinder output from all 47 species
Mp7g03500.1 EMB144, CIN4, COP10, FUS9 conjugation E2 protein. E2 conjugating component COP10... 0.04 OrthoFinder output from all 47 species
Msp_g27375 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65653 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20305 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05509 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g34310 ATUBC11, UBC11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006748 UBC10 not classified & original description: CDS=129-638 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018309 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Sam_g48365 No alias E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g050230.4.1 UBC10, Solyc05g050230 Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Spa_g05700 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11665 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21785 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26850 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31608 UBC31 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g35317 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g36347 UBC3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38402 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45237 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03039 ATUBC11, UBC11 E2 MUB ubiquiTin-conjugaTing enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04829 UBC10 E2 MUB ubiquiTin-conjugaTing enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019454_P001 ATUBC11, UBC11,... conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Zm00001e027303_P001 ATUBC11, UBC11,... conjugation E2 protein 0.05 OrthoFinder output from all 47 species
Zm00001e028859_P002 ATUBC11, UBC11,... conjugation E2 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!