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  5. Solyc06g007497.1.1

Solyc06g007497.1.1 (RCE1, Solyc06g007497)


Aliases : RCE1, Solyc06g007497

Description : RUB conjugation E2 protein (RCE1)


Gene families : OG0002378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g007497.1.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT2G18600 No alias Ubiquitin-conjugating enzyme family protein 0.01 OrthoFinder output from all 47 species
Als_g37718 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.01 OrthoFinder output from all 47 species
Aop_g67156 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08273 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.02 OrthoFinder output from all 47 species
Len_g04532 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g00364 RCE1 E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g06342 No alias E2 RUB ubiquitin-conjugating enzyme *(RCE1) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g007493.1.1 RCE1, Solyc06g007493 Probable NEDD8-conjugating enzyme Ubc12-like... 0.01 OrthoFinder output from all 47 species
Zm00001e030234_P001 RCE1, Zm00001e030234 RUB conjugation E2 protein (RCE1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 34 167
No external refs found!