1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g007350.4.1

Solyc06g007350.4.1 (Solyc06g007350)


Aliases : Solyc06g007350

Description : photosynthetic acclimation PBCP phosphatase


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g007350.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G30170 No alias Protein phosphatase 2C family protein 0.06 OrthoFinder output from all 47 species
AT4G33500 No alias Protein phosphatase 2C family protein 0.03 OrthoFinder output from all 47 species
Als_g32280 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20128 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g57774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68354 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ceric.1Z173900.1 Ceric.1Z173900 phosphatase *(PBCP) & original description:... 0.11 OrthoFinder output from all 47 species
Cre06.g256300 No alias Probable protein phosphatase 2C 55 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g09847 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33331 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26968 No alias phosphatase *(PBCP) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g02459 No alias phosphatase *(PBCP) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g17993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01024641001 No alias Photosynthesis.photophosphorylation.photosystem... 0.12 OrthoFinder output from all 47 species
LOC_Os01g07090.1 LOC_Os01g07090 photosynthetic acclimation PBCP phosphatase 0.05 OrthoFinder output from all 47 species
Len_g20278 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05138 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05276 No alias phosphatase *(PBCP) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g04619 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12898 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24669 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25213 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016822_P004 Zm00001e016822 photosynthetic acclimation PBCP phosphatase 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 86 302
No external refs found!