Solyc06g005220.2.1 (Solyc06g005220)


Aliases : Solyc06g005220

Description : Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana (sp|q6nq83|pp247_arath : 332.0)


Gene families : OG0014096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g005220.2.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020691001 No alias Pentatricopeptide repeat-containing protein At5g16640,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 374 404
IPR002885 Pentatricopeptide_repeat 303 349
IPR002885 Pentatricopeptide_repeat 161 210
IPR002885 Pentatricopeptide_repeat 91 140
IPR002885 Pentatricopeptide_repeat 20 70
IPR002885 Pentatricopeptide_repeat 231 280
No external refs found!