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  5. Solyc05g056310.3.1

Solyc05g056310.3.1 (Solyc05g056310)


Aliases : Solyc05g056310

Description : CCT3 subunit gamma of CCT chaperonin folding complex


Gene families : OG0005075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005075_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc05g056310.3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00176500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
AT5G26360 No alias TCP-1/cpn60 chaperonin family protein 0.09 OrthoFinder output from all 47 species
Adi_g087113 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Aev_g01274 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Ala_g14047 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Als_g08312 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Aop_g13024 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045781 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Ceric.25G052600.1 Ceric.25G052600 subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.79 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 OrthoFinder output from all 47 species
Dac_g00874 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
GSVIVT01000266001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 OrthoFinder output from all 47 species
GSVIVT01007770001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 OrthoFinder output from all 47 species
LOC_Os02g14929.1 LOC_Os02g14929 CCT3 subunit gamma of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
LOC_Os06g34690.1 LOC_Os06g34690 CCT3 subunit gamma of CCT chaperonin folding complex 0.09 OrthoFinder output from all 47 species
Len_g00631 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Lfl_g05564 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
MA_37504g0010 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Mp7g14360.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
Nbi_g01088 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Ore_g20439 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Pp3c10_13240V3.1 Pp3c10_13240 TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Pp3c12_7550V3.1 Pp3c12_7550 TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0213.g025987 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Sam_g15411 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Spa_g00971 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Zm00001e000822_P001 Zm00001e000822 CCT3 subunit gamma of CCT chaperonin folding complex 0.08 OrthoFinder output from all 47 species
Zm00001e024916_P001 Zm00001e024916 CCT3 subunit gamma of CCT chaperonin folding complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 31 524
No external refs found!