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  5. LOC_Os03g41110.1

LOC_Os03g41110.1


Description : C2H2 zinc finger transcription factor


Gene families : OG_01_0000055 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000055_tree ,
OG_02_0000021 (LandPlants) Phylogenetic Tree(s): OG_02_0000021_tree ,
OG_03_0000387 (SeedPlants) Phylogenetic Tree(s): OG_03_0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g41110.1
Cluster HCCA: Cluster_348

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00024p00186840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.05 Archaeplastida
AT2G37740 ZFP10, ATZFP10 zinc-finger protein 10 0.03 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.02 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.04 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01037897001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.08 Archaeplastida
Gb_16852 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os07g01180.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g26200.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_5999529g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g25140.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Solyc01g107430.2.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g049870.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016020_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e017991_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e025746_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.03 LandPlants
AMTR_s00024p00186840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 LandPlants
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AT1G24625 ZFP7 zinc finger protein 7 0.05 LandPlants
AT2G37740 ZFP10, ATZFP10 zinc-finger protein 10 0.03 LandPlants
AT3G09290 TAC1 telomerase activator1 0.02 LandPlants
AT5G25160 ZFP3 zinc finger protein 3 0.02 LandPlants
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.04 LandPlants
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 LandPlants
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
GSVIVT01037897001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.08 LandPlants
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Solyc05g009170.3.1 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Zm00001e009856_P001 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Zm00001e016020_P001 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
GSVIVT01037897001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 SeedPlants
Solyc07g006880.1.1 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants
Zm00001e009856_P001 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!