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Aliases : LHCA1, Solyc05g056060
Description : Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum (sp|p12360|cb11_sollc : 121.0)
Gene families : OG0002748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002748_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00175p00040360 | LHCA1,... | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G54890 | LHCA1 | photosystem I light harvesting complex gene 1 | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g16965 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g13726 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g25107 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03905 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g13553 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g16356 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g39130 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08720 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g53140 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0549.g076444 | LHCA1 | component *(LHCa1) of LHC-I complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g09880 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G087800.1 | LHCA1, Ceric.07G087800 | component *(LHCa1) of LHC-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G030000.1 | LHCA1, Ceric.12G030000 | component *(LHCa1) of LHC-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g283050 | LHCA1 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g06854 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g00729 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g34042 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g07919 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21883 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016295001 | LHCA1 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g21590.1 | LHCA1, LOC_Os06g21590 | component LHCa1 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431493g0010 | LHCA1 | component LHCa1 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g15420.1 | LHCA1 | component LHCa1 of LHC-I complex | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04952 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05868 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00268 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07161 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30412 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c3_12510V3.1 | LHCA1, Pp3c3_12510 | photosystem I light harvesting complex gene 1 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14315 | No alias | component *(LHCa1) of LHC-I complex & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g19176 | No alias | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo423144 | LHCA1 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04551 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g13153 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g13154 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09881 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g19220 | LHCA1 | component *(LHCa1) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013742_P001 | LHCA1, Zm00001e013742 | component LHCa1 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025141_P001 | LHCA1, Zm00001e025141 | component LHCa1 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |