1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g055990.4.1

Solyc05g055990.4.1 (PIP2;1, PIP2, PIP2A,...)


Aliases : PIP2;1, PIP2, PIP2A, Solyc05g055990

Description : plasma membrane intrinsic protein (PIP)


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055990.4.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00047680 BETA-TIP,... Solute transport.channels.MIP family.tonoplast intrinsic... 0.05 OrthoFinder output from all 47 species
AT2G16850 PIP3B, PIP2;8 plasma membrane intrinsic protein 2;8 0.03 OrthoFinder output from all 47 species
AT2G37180 RD28, PIP2;3, PIP2C Aquaporin-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G00430 TMP-C, PIP1;4, PIP1E plasma membrane intrinsic protein 1;4 0.04 OrthoFinder output from all 47 species
Aev_g10051 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21930 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Aev_g28128 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Ala_g12770 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17984 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Als_g51426 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g26338 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11808.t1 PIP2;1, PIP2,... plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Ceric.35G014200.1 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original... 0.02 OrthoFinder output from all 47 species
Dac_g04120 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08474 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Dac_g45536 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g04457 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Gb_02117 PIP1C, TMP-B, PIP1;3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g13120.1 TIP4;1, LOC_Os01g13120 tonoplast intrinsic protein (TIP) 0.04 OrthoFinder output from all 47 species
Len_g10418 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04447 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g38558 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
MA_123344g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.01 OrthoFinder output from all 47 species
MA_629271g0010 PIP3B, PIP2;8 Probable aquaporin PIP2-8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_68132g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.01 OrthoFinder output from all 47 species
MA_9821440g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.01 OrthoFinder output from all 47 species
Mp7g03380.1 PIP2;1, PIP2, PIP2A Aquaporin PIP2-1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g14930.1 DELTA-TIP3,... Aquaporin TIP2-3 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g29818 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g35278 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47455 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Nbi_g08152 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Ppi_g16840 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Ppi_g54349 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008268 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 33 263
No external refs found!