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  5. Solyc05g055850.3.1

Solyc05g055850.3.1 (RPH1, Solyc05g055850)


Aliases : RPH1, Solyc05g055850

Description : no description available(sp|m1c5m7|rph1_soltu : 397.0)


Gene families : OG0006050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055850.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G48070 RPH1 resistance to phytophthora 1 0.08 OrthoFinder output from all 47 species
Adi_g077594 RPH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g077595 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11899 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22056 RPH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08928 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33714.t1 RPH1, Aspi01Gene33714 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0268.g061074 RPH1 not classified & original description: CDS=29-781 0.05 OrthoFinder output from all 47 species
Cre03.g145207 RPH1 No description available 0.06 OrthoFinder output from all 47 species
Dac_g24608 RPH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11977 RPH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g06539 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011060001 RPH1 No description available 0.05 OrthoFinder output from all 47 species
LOC_Os05g33520.1 RPH1, LOC_Os05g33520 no description available(sp|m1c5m7|rph1_soltu : 245.0) 0.04 OrthoFinder output from all 47 species
Mp3g10840.1 RPH1 no description available(sp|q9zu82|rph1_arath : 223.0) 0.03 OrthoFinder output from all 47 species
Ore_g14460 RPH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g06747 RPH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18881 RPH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15587 RPH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017006 RPH1 not classified & original description: CDS=688-1419 0.03 OrthoFinder output from all 47 species
Smo165828 RPH1 No description available 0.04 OrthoFinder output from all 47 species
Spa_g11278 RPH1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g19889 RPH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031640_P002 RPH1, Zm00001e031640 no description available(sp|m1c5m7|rph1_soltu : 241.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA

No InterPro domains available for this sequence

No external refs found!