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  5. Solyc05g055790.4.1

Solyc05g055790.4.1 (Solyc05g055790)


Aliases : Solyc05g055790

Description : clade E phosphatase


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055790.4.1

Target Alias Description ECC score Gene Family Method Actions
AT3G05640 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
Adi_g085390 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08538 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05537 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07668 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26425 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G050200.1 Ceric.08G050200 clade E phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.18G040900.1 Ceric.18G040900 clade E phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10443 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15435 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26040 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g29030.1 LOC_Os05g29030 clade E phosphatase 0.04 OrthoFinder output from all 47 species
MA_18503g0010 No alias Probable protein phosphatase 2C 1 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Msp_g02032 No alias clade E phosphatase & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g08691 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06830 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13571 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g054300.3.1 Solyc07g054300 clade E phosphatase 0.06 OrthoFinder output from all 47 species
Spa_g06420 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01852 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014550_P002 Zm00001e014550 clade E phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e024356_P001 Zm00001e024356 clade E phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 76 357
No external refs found!