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  5. Solyc05g055310.3.1

Solyc05g055310.3.1 (ATX1, ATATX1, Solyc05g055310)


Aliases : ATX1, ATATX1, Solyc05g055310

Description : copper chaperone (CCH)


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055310.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00190630 NAKR2,... Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G06330 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G66240 ATX1, ATATX1 homolog of anti-oxidant 1 0.05 OrthoFinder output from all 47 species
AT1G71050 HIPP20 Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G08570 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g026532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12058.t1 Aspi01Gene12058 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15074.t1 CCH, Aspi01Gene15074 copper chaperone *(ATX/CCH) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16664.t1 Aspi01Gene16664 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59197.t1 Aspi01Gene59197 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015902 CCH copper chaperone *(ATX/CCH) & original description: CDS=82-618 0.03 OrthoFinder output from all 47 species
Ceric.16G064800.1 ATX1, ATATX1,... not classified & original description: pacid=50589807... 0.03 OrthoFinder output from all 47 species
Ceric.17G074200.1 Ceric.17G074200 not classified & original description: pacid=50618394... 0.03 OrthoFinder output from all 47 species
Ceric.23G004900.1 ATX1, ATATX1,... copper chaperone *(ATX/CCH) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g19504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30764 HIPP22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015420001 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017753001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.04 OrthoFinder output from all 47 species
Lfl_g24952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431832g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2102175g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_84241g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g08425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10662 NAKR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27007 ATX1, ATATX1 copper chaperone *(ATX/CCH) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g066880.3.1 Solyc01g066880 Heavy metal-associated isoprenylated plant protein 36... 0.03 OrthoFinder output from all 47 species
Solyc01g105000.3.1 Solyc01g105000 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g050710.4.1 Solyc06g050710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g017405.1.1 Solyc07g017405 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g007200.3.1 CCH, Solyc11g007200 copper chaperone (CCH) 0.06 OrthoFinder output from all 47 species
Tin_g04366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 7 62
No external refs found!