1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g054960.4.1

Solyc05g054960.4.1 (Solyc05g054960)


Aliases : Solyc05g054960

Description : RNA editing factor (MORF)


Gene families : OG0008097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008097_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054960.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00125410 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AT1G32580 No alias plastid developmental protein DAG, putative 0.04 OrthoFinder output from all 47 species
AT2G35240 No alias plastid developmental protein DAG, putative 0.05 OrthoFinder output from all 47 species
AT4G20020 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Gb_32072 No alias RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
Gb_40528 No alias RNA editing factor (MORF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g51280.1 LOC_Os04g51280 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g02600.1 LOC_Os06g02600 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g11020.1 LOC_Os11g11020 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
MA_5791g0010 No alias RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
Zm00001e021318_P001 Zm00001e021318 RNA editing factor (MORF) 0.02 OrthoFinder output from all 47 species
Zm00001e029854_P001 Zm00001e029854 RNA editing factor (MORF) 0.04 OrthoFinder output from all 47 species
Zm00001e040293_P001 Zm00001e040293 RNA editing factor (MORF) 0.02 OrthoFinder output from all 47 species
Zm00001e041660_P001 Zm00001e041660 RNA editing factor (MORF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!