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  5. Solyc05g054480.3.1

Solyc05g054480.3.1 (ACT11, Solyc05g054480)


Aliases : ACT11, Solyc05g054480

Description : actin filament protein


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054480.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00184900 ACT7,... Cytoskeleton.microfilament network.actin filament protein 0.04 OrthoFinder output from all 47 species
AT2G37620 AAc1, ACT1 actin 1 0.05 OrthoFinder output from all 47 species
AT3G46520 ACT12 actin-12 0.05 OrthoFinder output from all 47 species
AT3G53750 ACT3 actin 3 0.04 OrthoFinder output from all 47 species
AT5G59370 ACT4 actin 4 0.07 OrthoFinder output from all 47 species
Aev_g34643 ACT11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10645 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03449 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009647 ACT7 actin filament protein & original description: CDS=1-1191 0.02 OrthoFinder output from all 47 species
Cba_g12151 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g176833 ACT8 Cytoskeleton.microfilament network.actin filament protein 0.01 OrthoFinder output from all 47 species
Cre13.g603700 ACT11 Cytoskeleton.microfilament network.actin filament protein 0.04 OrthoFinder output from all 47 species
Dcu_g13866 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24197 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19068 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Gb_29180 ACT7 actin filament protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g36650.1 ACT7, LOC_Os10g36650 actin filament protein 0.03 OrthoFinder output from all 47 species
LOC_Os12g44350.1 ACT11, LOC_Os12g44350 actin filament protein 0.06 OrthoFinder output from all 47 species
Len_g56617 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
MA_135063g0010 ACT7 actin filament protein 0.02 OrthoFinder output from all 47 species
Mpzg00230.1 AAc1, ACT1 actin filament protein 0.02 OrthoFinder output from all 47 species
Ore_g09339 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02411 AAc1, ACT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22439 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23478 ACT7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29529 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005489_P002 ACT11, Zm00001e005489 actin filament protein 0.05 OrthoFinder output from all 47 species
Zm00001e009080_P001 ACT7, Zm00001e009080 actin filament protein 0.06 OrthoFinder output from all 47 species
Zm00001e012159_P001 ACT11, Zm00001e012159 actin filament protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!