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  5. Solyc05g054190.4.1

Solyc05g054190.4.1 (Solyc05g054190)


Aliases : Solyc05g054190

Description : CASP-like protein 2B1 OS=Vitis vinifera (sp|a7r385|csplc_vitvi : 239.0)


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054190.4.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00155660 evm_27.TU.AmTr_v1... CASP-like protein 2D1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AT1G17200 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
Adi_g005547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g031098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18231.t1 Aspi01Gene18231 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21004.t1 Aspi01Gene21004 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025274 No alias not classified & original description: CDS=467-1165 0.04 OrthoFinder output from all 47 species
Azfi_s0261.g060778 No alias not classified & original description: CDS=437-994 0.05 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.03 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.03 OrthoFinder output from all 47 species
Ceric.23G007600.1 Ceric.23G007600 not classified & original description: pacid=50611535... 0.04 OrthoFinder output from all 47 species
Ceric.23G007900.1 Ceric.23G007900 not classified & original description: pacid=50611019... 0.03 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g04097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431555g0010 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
MA_37849g0010 No alias CASP-like protein 2A1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
MA_5220g0010 No alias CASP-like protein 2BC2 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.04 OrthoFinder output from all 47 species
Msp_g06626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013801_P001 Zm00001e013801 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 26 173
No external refs found!