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  5. Solyc05g053880.4.1

Solyc05g053880.4.1 (Solyc05g053880)


Aliases : Solyc05g053880

Description : no hits & (original description: none)


Gene families : OG0007745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053880.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G43110 No alias unknown protein; Has 212 Blast hits to 211 proteins in... 0.07 OrthoFinder output from all 47 species
Dac_g20478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031673001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os04g28060.1 LOC_Os04g28060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g10980.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ppi_g58217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032704 Cms1 24 240
No external refs found!