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Aliases : Solyc05g053870
Description : RING-HC-class E3 ligase. ligating E3 protein (RGLG)
Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00061p00153710 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g32039 | No alias | E3 ubiquitin ligase *(RGLG) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g14175 | RGLG1 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g74655 | RGLG1 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g04105 | RGLG2 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12405 | No alias | E3 ubiquitin ligase *(RGLG) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02260 | RGLG1 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g25180 | RGLG2 | E3 ubiquitin ligase *(RGLG) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g68060.1 | RGLG2, LOC_Os01g68060 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g19030.1 | RGLG2, LOC_Os12g19030 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.02 | OrthoFinder output from all 47 species | |
| Smo148275 | RGLG2 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53579 | No alias | E3 ubiquitin ligase *(RGLG) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56861 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028521_P002 | RGLG2, Zm00001e028521 | RING-HC-class E3 ligase. ligating E3 protein (RGLG) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043531 | ADP binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010734 | Copine_C | 149 | 363 |
| No external refs found! |