1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g053860.4.1

Solyc05g053860.4.1 (3-Oct, ATOCT3, Solyc05g053860)


Aliases : 3-Oct, ATOCT3, Solyc05g053860

Description : organic cation transporter (OCT)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053860.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00186620 3-Oct, ATOCT3,... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
AMTR_s00043p00126560 AtOCT4, 4-Oct,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AT1G79410 AtOCT5, 5-Oct organic cation/carnitine transporter5 0.03 OrthoFinder output from all 47 species
Adi_g045207 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086045 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18655 AtOCT4, 4-Oct not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17442 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70561 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Cre09.g387060 AtOCT4, 4-Oct Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012912001 AtOCT1, 1-Oct Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
LOC_Os07g37510.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Len_g08973 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39356 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436973g0010 AtOCT1, 1-Oct organic cation transporter (OCT) 0.05 OrthoFinder output from all 47 species
Ore_g09748 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15859 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013040 AtOCT4, 4-Oct organic cation transporter *(OCT) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g063920.3.1 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Solyc12g017380.3.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.06 OrthoFinder output from all 47 species
Zm00001e041723_P001 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 54 464
No external refs found!