| Dac_g40851 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03920 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12405 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000005001 | No alias | GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000006001 | No alias | GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000546001 | No alias | GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031083001 | No alias | Protein degradation.peptidase families.aspartic-type... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_16234 | No alias | GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22250 | No alias | GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23543 | No alias | GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25827 | No alias | GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g11650.1 | LOC_Os01g11650 | GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g22640.1 | LOC_Os01g22640 | GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g46120.1 | LOC_Os01g46120 | GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g39590.1 | LOC_Os02g39590 | GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g04240.1 | LOC_Os05g04240 | GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g06720.2 | LOC_Os05g06720 | GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g06250.2 | LOC_Os06g06250 | GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g34120.1 | LOC_Os06g34120 | GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g39750.1 | LOC_Os07g39750 | GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17030 | FXG1, ATFXG1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g39145 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_42044g0010 | No alias | GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g02160.1 | FXG1, ATFXG1 | Alpha-L-fucosidase 3 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g13650.1 | No alias | GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g08148 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20494 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23065 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g37055 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43089 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17560 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07228 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g20529 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c2_2900V3.1 | Pp3c2_2900 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g33078 | No alias | not classified & original description: none | 0.05 | Solyc05g053240.4.1 details
- Home
- Species
- Solanum lycopersicum
- Sequence
- Solyc05g053240.4.1
Solyc05g053240.4.1 (SPL1, Solyc05g053240)
Aliases : SPL1, Solyc05g053240
Description : transcription factor (SBP)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | HRR: Solyc05g053240.4.1 | |
| Cluster | HCCA: Cluster_128 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| AT1G76580 | No alias | Squamosa promoter-binding protein-like (SBP domain)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15978 | No alias | SBP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08355 | No alias | SBP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.01G021200.1 | Ceric.01G021200 | SBP-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10806 | No alias | SBP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028208001 | SPL1 | RNA biosynthesis.transcriptional activation.SBP... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g39002 | SPL1 | SBP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27878 | No alias | SBP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006252_P001 | SPL1, Zm00001e006252 | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011712_P002 | SPL1, Zm00001e011712 | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003676 | nucleic acid binding | None | Extended |
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0005488 | binding | None | Extended |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0018995 | host cellular component | None | Extended |
| CC | GO:0033643 | host cell part | None | Extended |
| CC | GO:0033646 | host intracellular part | None | Extended |
| CC | GO:0033647 | host intracellular organelle | None | Extended |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | None | Extended |
| CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| CC | GO:0110165 | cellular anatomical entity | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | HCCA |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0019239 | deaminase activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
| IPR004333 | SBP_dom | 150 | 223 |
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