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  5. Solyc05g053240.4.1

Solyc05g053240.4.1 (SPL1, Solyc05g053240)


Aliases : SPL1, Solyc05g053240

Description : transcription factor (SBP)


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053240.4.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G76580 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 OrthoFinder output from all 47 species
Als_g15978 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08355 No alias SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G021200.1 Ceric.01G021200 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g10806 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028208001 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
Len_g39002 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27878 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006252_P001 SPL1, Zm00001e006252 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e011712_P002 SPL1, Zm00001e011712 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 150 223
No external refs found!