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  5. Solyc05g053160.3.1

Solyc05g053160.3.1 (Solyc05g053160)


Aliases : Solyc05g053160

Description : Membrane protein PM19L OS=Oryza sativa subsp. japonica (sp|q6l4d2|pm19l_orysj : 171.0)


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053160.3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT1G04560 No alias AWPM-19-like family protein 0.21 OrthoFinder output from all 47 species
Azfi_s0003.g007412 No alias not classified & original description: CDS=218-754 0.08 OrthoFinder output from all 47 species
Azfi_s0050.g031077 No alias not classified & original description: CDS=1-387 0.09 OrthoFinder output from all 47 species
Ceric.30G074200.1 Ceric.30G074200 not classified & original description: pacid=50608798... 0.03 OrthoFinder output from all 47 species
Dac_g01218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027944001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.09 OrthoFinder output from all 47 species
GSVIVT01031072001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
LOC_Os05g31670.1 LOC_Os05g31670 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.19 OrthoFinder output from all 47 species
LOC_Os07g24000.1 LOC_Os07g24000 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.19 OrthoFinder output from all 47 species
Len_g37428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g04480.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp3g04490.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp3g04500.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g03540.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g06045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29334 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g40749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007798 No alias not classified & original description: CDS=1-543 0.03 OrthoFinder output from all 47 species
Spa_g16199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033373_P001 Zm00001e033373 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 143
No external refs found!