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  5. Solyc05g052860.3.1

Solyc05g052860.3.1 (Solyc05g052860)


Aliases : Solyc05g052860

Description : GTPase effector (BDR)


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052860.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00180180 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00165p00000750 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT1G49840 No alias Protein of unknown function (DUF620) 0.02 OrthoFinder output from all 47 species
AT3G55720 No alias Protein of unknown function (DUF620) 0.05 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05740 No alias GTPase effector *(BDR) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g02214 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11719 No alias GTPase effector *(BDR) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01033432001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os01g55795.1 LOC_Os01g55795 GTPase effector (BDR) 0.01 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.01 OrthoFinder output from all 47 species
Lfl_g04065 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14366 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g022840.1.1 Solyc07g022840 GTPase effector (BDR) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006873 DUF620 136 385
No external refs found!