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  5. Solyc05g052570.3.1

Solyc05g052570.3.1 (SZF2, ATSZF2, ZFAR1,...)


Aliases : SZF2, ATSZF2, ZFAR1, CZF1, Solyc05g052570

Description : mRNA-binding regulatory factor (TZF)


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052570.3.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00102750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
AT2G40140 SZF2, ATSZF2, ZFAR1, CZF1 zinc finger (CCCH-type) family protein 0.11 OrthoFinder output from all 47 species
AT3G55980 ATSZF1, SZF1 salt-inducible zinc finger 1 0.15 OrthoFinder output from all 47 species
Adi_g020775 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Adi_g033634 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Adi_g038163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046241 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Adi_g046911 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Adi_g049127 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Adi_g054844 No alias regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Adi_g054845 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Adi_g075797 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Adi_g075958 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Adi_g113887 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aev_g04723 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aev_g05467 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ala_g05322 No alias regulatory factor *(TZF) of mRNA stress granule... 0.07 OrthoFinder output from all 47 species
Als_g05611 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Als_g10851 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Als_g47721 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Als_g62801 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aob_g07949 No alias regulatory factor *(TZF) of mRNA stress granule... 0.09 OrthoFinder output from all 47 species
Aop_g14168 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Aop_g14316 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aspi01Gene68944.t1 Aspi01Gene68944 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023744 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Azfi_s0524.g075292 ATSZF1, SZF1 regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Cba_g03917 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Cba_g05834 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Cba_g05838 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Cba_g21999 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Cba_g24777 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ceric.04G078500.1 Ceric.04G078500 regulatory factor *(TZF) of mRNA stress granule... 0.08 OrthoFinder output from all 47 species
Ceric.05G100900.1 Ceric.05G100900 regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Ceric.1Z168000.1 ATTZF1, ATCTH,... regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cre03.g146267 ATTZF1, ATCTH RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Dac_g10045 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Dac_g22345 No alias regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Dcu_g03161 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Dcu_g38463 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dde_g04448 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dde_g25533 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Ehy_g08338 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ehy_g08570 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
GSVIVT01024728001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.06 OrthoFinder output from all 47 species
GSVIVT01032807001 SZF2, ATSZF2, ZFAR1, CZF1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.16 OrthoFinder output from all 47 species
LOC_Os05g03760.1 LOC_Os05g03760 mRNA-binding regulatory factor (TZF) 0.12 OrthoFinder output from all 47 species
LOC_Os07g38090.2 LOC_Os07g38090 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33090.1 LOC_Os12g33090 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Len_g18302 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Len_g55937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02270 No alias regulatory factor *(TZF) of mRNA stress granule... 0.07 OrthoFinder output from all 47 species
Lfl_g06722 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Lfl_g28211 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_11306g0010 No alias mRNA-binding regulatory factor (TZF) 0.06 OrthoFinder output from all 47 species
Mp6g00540.1 No alias mRNA-binding regulatory factor (TZF) 0.05 OrthoFinder output from all 47 species
Msp_g10175 No alias regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Msp_g15903 No alias regulatory factor *(TZF) of mRNA stress granule... 0.1 OrthoFinder output from all 47 species
Nbi_g10809 No alias regulatory factor *(TZF) of mRNA stress granule... 0.07 OrthoFinder output from all 47 species
Ore_g15984 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g22043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29320 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g35856 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g41768 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pir_g22782 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pir_g26219 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pir_g43895 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pnu_g15715 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pnu_g16736 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Pnu_g20981 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pnu_g24839 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Pnu_g25039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c7_27400V3.1 Pp3c7_27400 CCCH-type zinc finger family protein 0.01 OrthoFinder output from all 47 species
Ppi_g01109 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ppi_g04592 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ppi_g10785 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Ppi_g31192 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004066 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005148 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010425 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Sam_g04991 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Solyc06g082010.4.1 Solyc06g082010 mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species
Solyc09g014644.1.1 PEI1, Solyc09g014644 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Solyc12g008660.1.1 Solyc12g008660 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Spa_g15791 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Spa_g30406 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Spa_g31285 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Spa_g43052 No alias regulatory factor *(TZF) of mRNA stress granule... 0.09 OrthoFinder output from all 47 species
Tin_g16529 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Zm00001e005347_P001 Zm00001e005347 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Zm00001e016582_P001 Zm00001e016582 mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species
Zm00001e027454_P001 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Zm00001e027566_P001 Zm00001e027566 mRNA-binding regulatory factor (TZF) 0.12 OrthoFinder output from all 47 species
Zm00001e029465_P001 Zm00001e029465 mRNA-binding regulatory factor (TZF) 0.08 OrthoFinder output from all 47 species
Zm00001e035805_P001 PEI1, Zm00001e035805 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 66 137
No external refs found!