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  5. Solyc05g052300.4.1

Solyc05g052300.4.1 (Solyc05g052300)


Aliases : Solyc05g052300

Description : solute transporter (AAAP)


Gene families : OG0000562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052300.4.1
Cluster HCCA: Cluster_419

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00254710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.01 OrthoFinder output from all 47 species
AMTR_s00006p00255390 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AMTR_s00006p00255930 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AT3G56200 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
Adi_g002002 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05170 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08070 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08697 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12757 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30788 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g001001 No alias solute transporter *(AAAP) & original description: CDS=1-1422 0.03 OrthoFinder output from all 47 species
Ceric.02G087600.1 Ceric.02G087600 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.12G054700.1 Ceric.12G054700 solute transporter *(AAAP) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.29G066800.1 Ceric.29G066800 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g07207 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14784 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21546 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33701 No alias solute transporter *(AAAP) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g01610 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032724001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Gb_00075 No alias solute transporter (AAAP) 0.01 OrthoFinder output from all 47 species
Gb_40430 No alias solute transporter (AAAP) 0.01 OrthoFinder output from all 47 species
Len_g20544 No alias solute transporter *(AAAP) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g20997 No alias solute transporter *(AAAP) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g00964 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43474 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02055 No alias solute transporter *(AAAP) & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g14617 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025323 No alias not classified & original description: CDS=1-897 0.02 OrthoFinder output from all 47 species
Tin_g02778 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 30 427
No external refs found!