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  5. Solyc05g052130.3.1

Solyc05g052130.3.1 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1, Solyc05g052130

Description : MCP1 programmed cell death metacaspase-like regulator


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc05g052130.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00201610 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.08 OrthoFinder output from all 47 species
AT4G25110 AtMC2, MC2 metacaspase 2 0.03 OrthoFinder output from all 47 species
Cba_g13227 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Ceric.29G073300.1 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
MA_264263g0010 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
MA_61045g0010 ATMC1, LOL3,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Smo104974 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.03 OrthoFinder output from all 47 species
Zm00001e001876_P001 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.04 OrthoFinder output from all 47 species
Zm00001e037975_P001 Zm00001e037975 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037976_P001 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 7 31
No external refs found!