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  5. Solyc05g051825.1.1

Solyc05g051825.1.1 (AGL104, Solyc05g051825)


Aliases : AGL104, Solyc05g051825

Description : transcription factor (MADS/AGL)


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g051825.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00214260 AGL66,... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AT1G77980 AGL66 AGAMOUS-like 66 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025354 AGL18 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07431 AGL6 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000802001 SHP2, AGL5 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01022182001 AGL104 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
Gb_03068 AGL16 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
LOC_Os04g49150.1 AGL6, LOC_Os04g49150 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os08g38590.1 AGL104, LOC_Os08g38590 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os11g43740.1 AGL65, LOC_Os11g43740 transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
MA_10332736g0010 STK, AGL11 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Zm00001e021053_P001 AGL30, Zm00001e021053 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e036127_P002 AGL66, Zm00001e036127 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!