Solyc05g051350.2.1 (Solyc05g051350)


Aliases : Solyc05g051350

Description : no hits & (original description: none)


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g051350.2.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT4G37950 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
AT4G38030 No alias Rhamnogalacturonate lyase family protein 0.04 OrthoFinder output from all 47 species
Adi_g126576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os08g44040.1 LOC_Os08g44040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g03790.1 LOC_Os12g03790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g13570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g13580.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp5g20220.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g03130.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g11130.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g11760.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc11g011290.3.1 Solyc11g011290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR029411 RG-lyase_III 489 677
IPR029413 RG-lyase_II 403 476
IPR010325 Rhamnogal_lyase 54 250
No external refs found!