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  5. Solyc05g051040.4.1

Solyc05g051040.4.1 (Solyc05g051040)


Aliases : Solyc05g051040

Description : RING-H2-class E3 ligase


Gene families : OG0001080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g051040.4.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.27G035500.1 Ceric.27G035500 E3 ubiquitin ligase *(RIE1) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g04796 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019826001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Len_g03224 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31196 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g03422 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011049 No alias not classified & original description: CDS=158-757 0.05 OrthoFinder output from all 47 species
Spa_g50746 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 339 381
No external refs found!