LOC_Os03g40180.1

Description : component RPL15 of LSU proteome component

Gene families : OG_01_0002310 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002310_tree ,
OG_02_0002154 (LandPlants) Phylogenetic Tree(s): OG_02_0002154_tree ,
OG_03_0002413 (SeedPlants) Phylogenetic Tree(s): OG_03_0002413_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g40180.1
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00111p00023340	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.14	Archaeplastida
AT4G16720	No alias	Ribosomal protein L23/L15e family protein	0.21	Archaeplastida
AT4G17390	No alias	Ribosomal protein L23/L15e family protein	0.34	Archaeplastida
Cpa\|evm.model.tig00000310.75	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.19	Archaeplastida
Cre02.g091100	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	Archaeplastida
GSVIVT01007404001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.26	Archaeplastida
GSVIVT01014039001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.18	Archaeplastida
GSVIVT01018183001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.18	Archaeplastida
Gb_32917	No alias	component RPL15 of LSU proteome component	0.04	Archaeplastida
Gb_36986	No alias	component RPL15 of LSU proteome component	0.15	Archaeplastida
MA_19619g0010	No alias	component RPL15 of LSU proteome component	0.04	Archaeplastida
MA_29804g0010	No alias	component RPL15 of LSU proteome component	0.24	Archaeplastida
Mp1g06500.1	No alias	component RPL15 of LSU proteome component	0.3	Archaeplastida
Pp3c14_22920V3.1	No alias	Ribosomal protein L23/L15e family protein	0.29	Archaeplastida
Pp3c17_22180V3.1	No alias	Ribosomal protein L23/L15e family protein	0.22	Archaeplastida
Pp3c1_37420V3.1	No alias	Ribosomal protein L23/L15e family protein	0.27	Archaeplastida
Pp3c20_2640V3.1	No alias	Ribosomal protein L23/L15e family protein	0.24	Archaeplastida
Pp3c2_5780V3.1	No alias	Ribosomal protein L23/L15e family protein	0.24	Archaeplastida
Pp3c8_22360V3.1	No alias	Ribosomal protein L23/L15e family protein	0.27	Archaeplastida
Smo270259	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.21	Archaeplastida
Solyc04g008460.4.1	No alias	component RPL15 of LSU proteome component	0.22	Archaeplastida
Solyc06g060400.3.1	No alias	component RPL15 of LSU proteome component	0.36	Archaeplastida
Solyc06g064630.3.1	No alias	component RPL15 of LSU proteome component	0.34	Archaeplastida
Zm00001e010380_P001	No alias	component RPL15 of LSU proteome component	0.33	Archaeplastida
Zm00001e032897_P001	No alias	component RPL15 of LSU proteome component	0.34	Archaeplastida
Zm00001e034995_P001	No alias	component RPL15 of LSU proteome component	0.36	Archaeplastida
Zm00001e034996_P001	No alias	component RPL15 of LSU proteome component	0.37	Archaeplastida
AMTR_s00111p00023340	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.14	LandPlants
AT4G16720	No alias	Ribosomal protein L23/L15e family protein	0.18	LandPlants
AT4G17390	No alias	Ribosomal protein L23/L15e family protein	0.34	LandPlants
GSVIVT01007404001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.26	LandPlants
GSVIVT01014039001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.17	LandPlants
GSVIVT01018183001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.16	LandPlants
Gb_32917	No alias	component RPL15 of LSU proteome component	0.03	LandPlants
Gb_36986	No alias	component RPL15 of LSU proteome component	0.14	LandPlants
MA_19619g0010	No alias	component RPL15 of LSU proteome component	0.04	LandPlants
Mp1g06500.1	No alias	component RPL15 of LSU proteome component	0.29	LandPlants
Pp3c14_22920V3.1	No alias	Ribosomal protein L23/L15e family protein	0.27	LandPlants
Pp3c17_22180V3.1	No alias	Ribosomal protein L23/L15e family protein	0.22	LandPlants
Pp3c1_37420V3.1	No alias	Ribosomal protein L23/L15e family protein	0.27	LandPlants
Pp3c20_2640V3.1	No alias	Ribosomal protein L23/L15e family protein	0.23	LandPlants
Pp3c2_5780V3.1	No alias	Ribosomal protein L23/L15e family protein	0.24	LandPlants
Pp3c8_22360V3.1	No alias	Ribosomal protein L23/L15e family protein	0.25	LandPlants
Smo270259	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.19	LandPlants
Solyc04g008460.4.1	No alias	component RPL15 of LSU proteome component	0.22	LandPlants
Solyc06g060400.3.1	No alias	component RPL15 of LSU proteome component	0.34	LandPlants
Solyc06g064630.3.1	No alias	component RPL15 of LSU proteome component	0.34	LandPlants
Zm00001e010380_P001	No alias	component RPL15 of LSU proteome component	0.31	LandPlants
Zm00001e032897_P001	No alias	component RPL15 of LSU proteome component	0.33	LandPlants
Zm00001e034995_P001	No alias	component RPL15 of LSU proteome component	0.35	LandPlants
Zm00001e034996_P001	No alias	component RPL15 of LSU proteome component	0.34	LandPlants
AMTR_s00111p00023340	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.14	SeedPlants
AT4G16720	No alias	Ribosomal protein L23/L15e family protein	0.18	SeedPlants
AT4G17390	No alias	Ribosomal protein L23/L15e family protein	0.33	SeedPlants
GSVIVT01007404001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.26	SeedPlants
GSVIVT01014039001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.17	SeedPlants
GSVIVT01018183001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.16	SeedPlants
Gb_32917	No alias	component RPL15 of LSU proteome component	0.03	SeedPlants
Gb_36986	No alias	component RPL15 of LSU proteome component	0.14	SeedPlants
MA_19619g0010	No alias	component RPL15 of LSU proteome component	0.03	SeedPlants
Solyc04g008460.4.1	No alias	component RPL15 of LSU proteome component	0.21	SeedPlants
Solyc06g060400.3.1	No alias	component RPL15 of LSU proteome component	0.33	SeedPlants
Solyc06g064630.3.1	No alias	component RPL15 of LSU proteome component	0.33	SeedPlants
Zm00001e010380_P001	No alias	component RPL15 of LSU proteome component	0.3	SeedPlants
Zm00001e032897_P001	No alias	component RPL15 of LSU proteome component	0.32	SeedPlants
Zm00001e034995_P001	No alias	component RPL15 of LSU proteome component	0.35	SeedPlants
Zm00001e034996_P001	No alias	component RPL15 of LSU proteome component	0.33	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000439	Ribosomal_L15e	2	190

External Links

No external refs found!

LOC_Os03g40180.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation