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  5. Solyc05g045826.1.1

Solyc05g045826.1.1 (Solyc05g045826)


Aliases : Solyc05g045826

Description : Ribosomal protein S3, mitochondrial OS=Petunia hybrida (sp|q04716|rt03_pethy : 95.5)


Gene families : OG0009011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g045826.1.1
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272590 evm_27.TU.AmTr_v1... Ribosomal protein S3, mitochondrial OS=Petunia hybrida 0.01 OrthoFinder output from all 47 species
ATMG00090 No alias structural constituent of ribosome;protein binding 0.01 OrthoFinder output from all 47 species
Aev_g20617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05492 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g23054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g33316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51885 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_13807 No alias Ribosomal protein S3, mitochondrial OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Nbi_g22008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!