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  5. Solyc05g044490.3.1

Solyc05g044490.3.1 (Solyc05g044490)


Aliases : Solyc05g044490

Description : Late blight resistance protein R1-A OS=Solanum demissum (sp|q8w1e0|r1a_solde : 392.0)


Gene families : OG0011699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g044490.3.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Solyc05g009760.3.1 Solyc05g009760 Putative late blight resistance protein homolog R1B-16... 0.05 OrthoFinder output from all 47 species
Solyc06g064680.1.1 RPP13, Solyc06g064680 Putative late blight resistance protein homolog R1B-12... 0.04 OrthoFinder output from all 47 species
Solyc06g064750.1.1 Solyc06g064750 Putative late blight resistance protein homolog R1B-12... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 141 380
No external refs found!