1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g023770.4.1

Solyc05g023770.4.1 (Solyc05g023770)


Aliases : Solyc05g023770

Description : Coiled-coil domain-containing protein SCD2 OS=Arabidopsis thaliana (sp|q8rwd5|scd2_arath : 267.0)


Gene families : OG0003024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g023770.4.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00160930 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.03 OrthoFinder output from all 47 species
AT5G13260 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46404.t1 Aspi01Gene46404 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004935001 No alias Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.06 OrthoFinder output from all 47 species
LOC_Os01g70320.1 LOC_Os01g70320 SCD2 component of post-Golgi trafficking SCD complex 0.02 OrthoFinder output from all 47 species
Len_g58694 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g05820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018754_P001 Zm00001e018754 SCD2 component of post-Golgi trafficking SCD complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!