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  5. Solyc05g023730.1.1

Solyc05g023730.1.1 (RPL2.1, Solyc05g023730)


Aliases : RPL2.1, Solyc05g023730

Description : 50S ribosomal protein L2, chloroplastic OS=Nicotiana debneyi (sp|p21434|rk2_nicde : 149.0)


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g023730.1.1

Target Alias Description ECC score Gene Family Method Actions
Gb_17475 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 OrthoFinder output from all 47 species
Gb_24024 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 OrthoFinder output from all 47 species
Gb_25047 RPL2.1 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 OrthoFinder output from all 47 species
Lfl_g32423 No alias component *(uL2m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc00g500035.1.1 RPL2.1, Solyc00g500035 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.12 OrthoFinder output from all 47 species
Solyc00g500047.1.1 RPL2.1, Solyc00g500047 50S ribosomal protein L2, chloroplastic OS=Solanum... 0.12 OrthoFinder output from all 47 species
Solyc00g500079.1.1 RPL2.1, Solyc00g500079 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.12 OrthoFinder output from all 47 species
Solyc00g500150.1.1 RPL2.1, Solyc00g500150 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 OrthoFinder output from all 47 species
Solyc00g500297.1.1 RPL2.1, Solyc00g500297 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.12 OrthoFinder output from all 47 species
Solyc02g150102.1.1 RPL2.1, Solyc02g150102 50S ribosomal protein L2, chloroplastic OS=Aethionema... 0.04 OrthoFinder output from all 47 species
Zm00001e042370_P001 RPL2.1, Zm00001e042370 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 8 68
No external refs found!