1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g018780.1.1

Solyc05g018780.1.1 (Solyc05g018780)


Aliases : Solyc05g018780

Description : WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana (sp|o22468|msi2_arath : 85.1)


Gene families : OG0004386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004386_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g018780.1.1
Cluster HCCA: Cluster_83


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 220 254
IPR022052 Histone-bd_RBBP4_N 36 102
No external refs found!