Solyc05g018750.4.1 (Solyc05g018750)


Aliases : Solyc05g018750

Description : GBF-interacting protein 1 OS=Arabidopsis thaliana (sp|q8vzs6|gip1_arath : 96.3)


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g018750.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G29350 No alias Kinase-related protein of unknown function (DUF1296) 0.04 OrthoFinder output from all 47 species
Adi_g008163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g025128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g129392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60611.t1 Aspi01Gene60611 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007708 No alias not classified & original description: CDS=120-2903 0.03 OrthoFinder output from all 47 species
Cba_g32658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014730001 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030121001 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g47430.1 LOC_Os01g47430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g06750.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028004_P001 Zm00001e028004 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032451_P001 Zm00001e032451 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 17 76
No external refs found!