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Aliases : THO2, AtTHO2, Solyc05g017890
Description : component THOC2/Tho2 of mRNP trafficking THO subcomplex
Gene families : OG0003635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003635_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00138p00044110 | THO2, AtTHO2,... | RNA processing.messenger ribonucleoprotein particle... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G24706 | THO2, AtTHO2 | THO2 | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g107430 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g08657 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g38322 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g01214 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g29810 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g07582 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene09828.t1 | THO2, AtTHO2,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene09832.t1 | THO2, AtTHO2,... | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0362.g066911 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G073400.1 | THO2, AtTHO2,... | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.11 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001428.15 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g507700 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g15531 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g02056 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.11 | OrthoFinder output from all 47 species | |
| Dde_g04015 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g01710 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011619001 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_33812 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os01g68810.1 | THO2, AtTHO2,... | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.07 | OrthoFinder output from all 47 species | |
| Len_g01408 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g04297 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.11 | OrthoFinder output from all 47 species | |
| MA_10184563g0010 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.02 | OrthoFinder output from all 47 species | |
| MA_10430572g0010 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.08 | OrthoFinder output from all 47 species | |
| MA_10431208g0010 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g20320.1 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g02102 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g01515 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g16129 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.09 | OrthoFinder output from all 47 species | |
| Pir_g17399 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g04007 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0104.g020047 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g51475 | No alias | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
| Smo173562 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g18725 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g08678 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |