1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g015890.4.1

Solyc05g015890.4.1 (Solyc05g015890)


Aliases : Solyc05g015890

Description : no hits & (original description: none)


Gene families : OG0002298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002298_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g015890.4.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00118670 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G27990 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.22 OrthoFinder output from all 47 species
Ala_g11784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G096600.1 Ceric.03G096600 not classified & original description: pacid=50571601... 0.03 OrthoFinder output from all 47 species
Dde_g06274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010531001 No alias No description available 0.1 OrthoFinder output from all 47 species
Gb_25070 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g31710.1 LOC_Os04g31710 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Mp6g08810.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g06049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo270945 No alias No description available 0.05 OrthoFinder output from all 47 species
Spa_g12163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040746_P001 Zm00001e040746 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!