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  5. Solyc05g014370.3.1

Solyc05g014370.3.1 (MAD2, Solyc05g014370)


Aliases : MAD2, Solyc05g014370

Description : MAD2 spindle assembly checkpoint protein


Gene families : OG0006342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g014370.3.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT3G25980 MAD2 DNA-binding HORMA family protein 0.12 OrthoFinder output from all 47 species
Aev_g19678 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.03 OrthoFinder output from all 47 species
Ala_g19589 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.06 OrthoFinder output from all 47 species
Als_g12979 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g02412 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.04 OrthoFinder output from all 47 species
Cre08.g380400 MAD2 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Dac_g10764 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g12404 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01010325001 MAD2 Cell cycle.mitosis and meiosis.sister chromatid... 0.1 OrthoFinder output from all 47 species
Gb_04850 MAD2 MAD2 spindle assembly checkpoint protein 0.07 OrthoFinder output from all 47 species
Len_g58649 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.03 OrthoFinder output from all 47 species
MA_19675g0010 MAD2 MAD2 spindle assembly checkpoint protein 0.04 OrthoFinder output from all 47 species
Mp6g18990.1 MAD2 MAD2 spindle assembly checkpoint protein 0.04 OrthoFinder output from all 47 species
Ore_g40517 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008580 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.02 OrthoFinder output from all 47 species
Sam_g11104 No alias spindle assembly checkpoint protein *(MAD2) & original... 0.04 OrthoFinder output from all 47 species
Spa_g52388 MAD2 spindle assembly checkpoint protein *(MAD2) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR003511 HORMA_dom 16 191
No external refs found!