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  5. Solyc05g013780.3.1

Solyc05g013780.3.1 (Solyc05g013780)


Aliases : Solyc05g013780

Description : plant-specific RAB5 effector (PUF2)


Gene families : OG0003055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013780.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00076690 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
AT1G24560 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Adi_g005067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06109.t1 Aspi01Gene06109 RAB5 plant-specific effector *(PUF2) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03301 No alias RAB5 plant-specific effector *(PUF2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G092100.1 Ceric.09G092100 not classified & original description: pacid=50587819... 0.04 OrthoFinder output from all 47 species
Smo413961 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!