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  5. Solyc05g013490.4.1

Solyc05g013490.4.1 (Solyc05g013490)


Aliases : Solyc05g013490

Description : no hits & (original description: none)


Gene families : OG0005057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013490.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g057741 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g084683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G048500.1 Ceric.04G048500 not classified & original description: pacid=50631123... 0.05 OrthoFinder output from all 47 species
Dac_g23059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33502 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os04g56630.1 LOC_Os04g56630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g30821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006657_P003 Zm00001e006657 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!