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  5. Solyc05g012325.1.1

Solyc05g012325.1.1 (UPS1, ATUPS1, Solyc05g012325)


Aliases : UPS1, ATUPS1, Solyc05g012325

Description : nucleobase cation transporter (UPS)


Gene families : OG0003059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g012325.1.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g31860.1 UPS5, ATUPS5,... nucleobase cation transporter (UPS) 0.02 OrthoFinder output from all 47 species
Smo124621 UPS1, ATUPS1 Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0071705 nitrogen compound transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR009834 Ureide_permease 41 366
No external refs found!