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  5. Solyc05g010180.4.1

Solyc05g010180.4.1 (Solyc05g010180)


Aliases : Solyc05g010180

Description : Prolycopene isomerase, chloroplastic OS=Daucus carota (sp|q2vex9|crtso_dauca : 128.0)


Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g010180.4.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00187330 evm_27.TU.AmTr_v1... Prolycopene isomerase, chloroplastic OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Aev_g11475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06469 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33225 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene67250.t1 Aspi01Gene67250 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001258.10 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020723.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre09.g407200 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.05 OrthoFinder output from all 47 species
Dcu_g10069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023233001 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota 0.08 OrthoFinder output from all 47 species
Gb_39487 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g62510.1 LOC_Os03g62510 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.02 OrthoFinder output from all 47 species
Lfl_g05426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10428660g0010 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.04 OrthoFinder output from all 47 species
Mp7g17990.1 No alias Prolycopene isomerase, chloroplastic OS=Solanum... 0.02 OrthoFinder output from all 47 species
Nbi_g08605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo229587 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.03 OrthoFinder output from all 47 species
Spa_g10638 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011669_P002 Zm00001e011669 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 56 450
No external refs found!