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  5. Solyc05g009960.4.1

Solyc05g009960.4.1 (Solyc05g009960)


Aliases : Solyc05g009960

Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana (sp|q9lig0|y3136_arath : 160.0)


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g009960.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00129830 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
AMTR_s00071p00130010 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00071p00133060 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
Ehy_g30745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
Gb_16262 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_10427711g0010 No alias Clavaminate synthase-like protein At3g21360... 0.01 OrthoFinder output from all 47 species
MA_796805g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Ore_g24966 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo439273 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 6 196
No external refs found!