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  5. Solyc05g009640.4.1

Solyc05g009640.4.1 (Solyc05g009640)


Aliases : Solyc05g009640

Description : transcription factor (bHLH)


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g009640.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G22760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G37850 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g047963 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene66514.t1 Aspi01Gene66514 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13960 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G102500.1 Ceric.03G102500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09650 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002833001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01003697001 NAI1 RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.11 OrthoFinder output from all 47 species
LOC_Os03g12760.1 LOC_Os03g12760 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
LOC_Os12g43620.1 LOC_Os12g43620 transcription factor (bHLH). bHLH-IVa-class iron... 0.05 OrthoFinder output from all 47 species
Lfl_g10698 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
MA_50811g0010 NAI1 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
Msp_g03516 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48784 NAI1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31815 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g35905 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091810.2.1 Solyc02g091810 transcription factor (bHLH). bHLH-IVa-class iron... 0.07 OrthoFinder output from all 47 species
Solyc06g064590.3.1 Solyc06g064590 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Zm00001e000935_P001 Zm00001e000935 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Zm00001e002570_P001 Zm00001e002570 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e003313_P001 NAI1, Zm00001e003313 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
Zm00001e003314_P001 Zm00001e003314 transcription factor (bHLH). bHLH-IVa-class iron... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 82 127
No external refs found!