1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g009600.4.1

Solyc05g009600.4.1 (PR 65, PP2AA2, PDF1,...)


Aliases : PR 65, PP2AA2, PDF1, Solyc05g009600

Description : scaffolding component PP2A-phosphatase of TON1-TRM-PP2A (TTP) preprophase band formation complex. scaffold component A of PP2A phosphatase complexes


Gene families : OG0004583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004583_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g009600.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00236090 PR 65, PP2AA2,... Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.28 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
Cre11.g477300 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
Gb_34599 PR 65, PP2AA2, PDF1 scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07510.1 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.04 OrthoFinder output from all 47 species
Nbi_g27630 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Smo232183 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
Tin_g10543 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Zm00001e036610_P002 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.04 OrthoFinder output from all 47 species
Zm00001e037405_P003 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000357 HEAT 176 204
No external refs found!