- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CDF1, Solyc05g007880
Description : Cyclic dof factor 2 OS=Arabidopsis thaliana (sp|q93zl5|cdf2_arath : 103.0)
Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00248860 | TMO6,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00264070 | CDF3,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00099150 | CDF2,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G26790 | No alias | Dof-type zinc finger DNA-binding family protein | 0.18 | OrthoFinder output from all 47 species | |
| AT3G47500 | CDF3 | cycling DOF factor 3 | 0.06 | OrthoFinder output from all 47 species | |
| AT5G02460 | No alias | Dof-type zinc finger DNA-binding family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G39660 | CDF2 | cycling DOF factor 2 | 0.06 | OrthoFinder output from all 47 species | |
| AT5G62430 | CDF1 | cycling DOF factor 1 | 0.14 | OrthoFinder output from all 47 species | |
| Adi_g079893 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18800 | CDF3 | transcription factor *(DOF) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g11020 | CDF2 | transcription factor *(DOF) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g18462 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20563 | ADOF1, DOF1 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g51755 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04142 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08332 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13553.t1 | CDF3, Aspi01Gene13553 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene47016.t1 | CDF2, Aspi01Gene47016 | transcription factor *(DOF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033832 | CDF3 | transcription factor *(DOF) & original description: CDS=354-1853 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.20G020200.1 | CDF1, Ceric.20G020200 | transcription factor *(DOF) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cre12.g521150 | CDF2 | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07633 | CDF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25853 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16037 | ADOF2, DOF2 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g28530 | No alias | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007992001 | CDF1 | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011433001 | CDF2 | RNA biosynthesis.transcriptional activation.C2C2... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01019969001 | CDF1 | RNA biosynthesis.transcriptional activation.C2C2... | 0.15 | OrthoFinder output from all 47 species | |
| GSVIVT01021212001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029943001 | CDF3 | RNA biosynthesis.transcriptional activation.C2C2... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_07177 | CDF2 | transcription factor (DOF) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os01g15900.1 | CDF2, LOC_Os01g15900 | transcription factor (DOF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g07360.1 | CDF3, LOC_Os03g07360 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g38870.1 | LOC_Os03g38870 | transcription factor (DOF) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os07g48570.1 | CDF2, LOC_Os07g48570 | transcription factor (DOF) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g26620.1 | CDF1, LOC_Os10g26620 | transcription factor (DOF) | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g03006 | No alias | transcription factor *(DOF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_123810g0010 | OBP4 | transcription factor (DOF) | 0.05 | OrthoFinder output from all 47 species | |
| MA_944867g0010 | No alias | transcription factor (DOF) | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g16351 | OBP4 | transcription factor *(DOF) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g22212 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g18526 | TMO6 | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13474 | No alias | transcription factor *(DOF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo89924 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000526_P001 | CDF3, Zm00001e000526 | transcription factor (DOF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017319_P001 | CDF2, Zm00001e017319 | transcription factor (DOF) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |