1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g007760.2.1

Solyc05g007760.2.1 (ATXR1, SDG35, Solyc05g007760)


Aliases : ATXR1, SDG35, Solyc05g007760

Description : class III/Trithorax histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0000533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g007760.2.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene26353.t2 ATXR1, SDG35,... histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012615001 ATXR1, SDG35 Chromatin organisation.histone modifications.histone... 0.17 OrthoFinder output from all 47 species
LOC_Os03g07260.1 ATXR1, SDG35,... class III/Trithorax histone methyltransferase component... 0.22 OrthoFinder output from all 47 species
Mp1g15800.1 ATXR1, SDG35 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Smo407841 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Zm00001e000519_P001 ATXR1, SDG35,... class III/Trithorax histone methyltransferase component... 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 187 365
No external refs found!