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  5. Solyc05g007660.2.1

Solyc05g007660.2.1 (Solyc05g007660)


Aliases : Solyc05g007660

Description : RING-v-class E3 ligase


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc05g007660.2.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g009055 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023570 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07597 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61209 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11181 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1036.g095899 No alias not classified & original description: CDS=293-679 0.04 OrthoFinder output from all 47 species
Cba_g05081 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04802 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48587 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030910001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_12336 No alias RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_38414 No alias RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g02124 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09771 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60879 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23981 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 114 232
IPR011016 Znf_RING-CH 63 108
No external refs found!