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  5. Solyc05g007470.4.1

Solyc05g007470.4.1 (Solyc05g007470)


Aliases : Solyc05g007470

Description : AAA-ATPase At3g28580 OS=Arabidopsis thaliana (sp|q9ljj7|aatp9_arath : 354.0)


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g007470.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G50930 BCS1 cytochrome BC1 synthesis 0.02 OrthoFinder output from all 47 species
AT5G40010 AATP1 AAA-ATPase 1 0.04 OrthoFinder output from all 47 species
Aev_g03969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G071100.1 Ceric.19G071100 not classified & original description: pacid=50575396... 0.05 OrthoFinder output from all 47 species
GSVIVT01010357001 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01018890001 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01032553001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01032554001 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os03g38800.1 LOC_Os03g38800 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58800.1 AATP1, LOC_Os03g58800 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g09490.1 AATP1, LOC_Os07g09490 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_585362g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pnu_g09594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo75451 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g033790.4.1 BCS1, Solyc03g033790 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc03g033840.4.1 BCS1, Solyc03g033840 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g007280.4.1 BCS1, Solyc10g007280 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e003357_P001 AATP1, Zm00001e003357 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e035111_P001 BCS1, Zm00001e035111 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 63 214
No external refs found!