Solyc05g007020.4.1 (PLPB, PLPA, PLPC,...)


Aliases : PLPB, PLPA, PLPC, PLP, Solyc05g007020

Description : PLP UV-A/blue light photoreceptor


Gene families : OG0002747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g007020.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G02710 PLPB, PLPA, PLPC, PLP PAS/LOV protein B 0.03 OrthoFinder output from all 47 species
Adi_g055409 PLPB, PLPA, PLPC, PLP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34168 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G064400.1 PLPB, PLPA,... UV-A/blue light photoreceptor *(PLP) & original... 0.08 OrthoFinder output from all 47 species
Dac_g11510 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22858 PLPB, PLPA, PLPC, PLP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08449 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020075001 PLPB, PLPA, PLPC, PLP Protein TWIN LOV 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g21360 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39545 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g03660.1 PLPB, PLPA, PLPC, PLP PLP UV-A/blue light photoreceptor 0.08 OrthoFinder output from all 47 species
Msp_g09026 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25925 PLPB, PLPA, PLPC, PLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46439 PLPB, PLPA, PLPC, PLP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09118 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 268 363
IPR000014 PAS 29 131
No external refs found!